Creates a new table for performing, storing and viewing functional enrichment analysis

An explorative network building plugin that works with the BioGateway triple store

Visualizes enrichments of pathways as an enrichment map, a network representing overlaps among enriched pathways.

Core App: CX JSON file reader and writer

Creates and visualizes a functionally grouped network of terms/pathways

Calculates overrepresented GO terms in the network and display them as a network of significant GO terms.

Clusters a given network based on topology to find densely connected regions.

Import and augment Cytoscape networks from STRING

CluePedia: A ClueGO plugin for pathway insights using integrated experimental and in silico data

Highly sophisticated algorithms for arranging networks.