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data visualization
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network analysis
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export
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pathway
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Random walk with restart algorithm
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microarrays
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gene co-expression
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shortest paths
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R
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Protein complex
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Pathway finding
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Gene prioritization
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structural biology
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signaling
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search
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kegg
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JavaScript
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gene function prediction
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bayesian networks
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variant analysis
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subnetwork extraction
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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non-coding RNA
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network repository
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inference
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graph clustering
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genome visualization
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drug repurposing
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disease module
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disease-disease association
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Community detection
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Cancer
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Boolean Network
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Network repository
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CyNDEx-2
Core App: CyNDEx-2 is a user-friendly app for browsing, importing, and exporting networks to an NDEx server.
CyNDEx-2
Core App: CyNDEx-2 is a user-friendly app for browsing, importing, and exporting networks to an NDEx server.
(4) 57057 downloads
SDP Model Builder
Cytoscape 3 app that interfaces with Selventa Development Platform
SDP Model Builder
Cytoscape 3 app that interfaces with Selventa Development Platform
(0) 2130 downloads
Pesca3.0
Pesca3.0
(9) 5007 downloads
Unsupported Plugins for Cytoscape 2.x
