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collections
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data visualization
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export
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cancer data analysis
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linked data
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simulation
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Random walk with restart algorithm
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network learning
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microarrays
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centrality analysis
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3d visualization
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social network analysis
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shortest paths
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sequence similarity
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R
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Protein complex
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Pathway finding
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Gene prioritization
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gene co-expression
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structural biology
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JavaScript
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gene function prediction
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flux analysis
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variant analysis
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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network repository
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kegg
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inference
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genome visualization
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disease-disease association
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Cancer
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Boolean Network
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bayesian networks
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Linked data
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cyBrowser
Core App: Add HTML Browser to Cytoscape
cyBrowser
Core App: Add HTML Browser to Cytoscape
(0) 34820 downloads
FileWatcher
An App to Link Networks with Excel Files
FileWatcher
An App to Link Networks with Excel Files
(0) 2719 downloads
Omics Visualizer
Import & Visualize several data for the same node
Omics Visualizer
Import & Visualize several data for the same node
(8) 11002 downloads
WikiDataScape
A WikiData explorer for Cytoscape
WikiDataScape
A WikiData explorer for Cytoscape
(3) 7335 downloads
CyLinkPredictor
Link Predictor Based on Common Neighbors
CyLinkPredictor
Link Predictor Based on Common Neighbors
(3) 2010 downloads
General SPARQL
Navigate SPARQL endpoints. Comes with a predefined set of SPARQL queries that work with public endpoints from EBI RDF platform and Bio2RDF
General SPARQL
Navigate SPARQL endpoints. Comes with a predefined set of SPARQL queries that work with public endpoints from EBI RDF platform and Bio2RDF
(10) 13803 downloads
SemScape
Visualizes Semantic Data Landscapes
SemScape
Visualizes Semantic Data Landscapes
(35) 6138 downloads
Unsupported Plugins for Cytoscape 2.x