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collections
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data visualization
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network analysis
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pathway
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networks
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export
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cancer data analysis
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gene regulation
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functional module detection
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disease
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animation
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molecular structure
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centrality analysis
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simulation
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Random walk with restart algorithm
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network learning
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microarrays
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3d visualization
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social network analysis
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shortest paths
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sequence similarity
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R
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Protein complex
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Pathway finding
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network alignment
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Gene prioritization
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gene co-expression
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data manipulation
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cluster visualization
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structural biology
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SPARQL
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signaling
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search
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SBML
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literature mining
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JavaScript
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gene function prediction
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flux analysis
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variant analysis
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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network repository
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kegg
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inference
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genome visualization
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disease-disease association
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Cancer
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Boolean Network
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bayesian networks
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Data manipulation
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cyChart
An interactive tool to define filters
cyChart
An interactive tool to define filters
(1) 40175 downloads
Cyni Toolbox
Cytoscape Network Inference Toolbox puts together several tools that allow infering networks from bio data (For Cytoscape 3.1+)
Cyni Toolbox
Cytoscape Network Inference Toolbox puts together several tools that allow infering networks from bio data (For Cytoscape 3.1+)
(25) 18212 downloads
Rene
Regulatory Network Enhancing Plugin - ReNE allows users to enhance standard KEGG/Reactome pathways wit
Rene
Regulatory Network Enhancing Plugin - ReNE allows users to enhance standard KEGG/Reactome pathways wit
(12) 27227 downloads
CyDataSeries
Add time series and the like to your networks.
CyDataSeries
Add time series and the like to your networks.
(1) 6008 downloads
cyTransFinder
Signal Transduction Pathway Finder
cyTransFinder
Signal Transduction Pathway Finder
(3) 18020 downloads
Unsupported Plugins for Cytoscape 2.x
