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Random walk with restart algorithm
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microarrays
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social network analysis
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shortest paths
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sequence similarity
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R
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Protein complex
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Gene prioritization
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gene co-expression
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search
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JavaScript
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gene function prediction
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flux analysis
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variant analysis
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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network repository
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kegg
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inference
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genome visualization
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disease-disease association
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Cancer
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Boolean Network
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bayesian networks
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Data manipulation
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cyChart
An interactive tool to define filters
cyChart
An interactive tool to define filters
(1) 35752 downloads
Cyni Toolbox
Cytoscape Network Inference Toolbox puts together several tools that allow infering networks from bio data (For Cytoscape 3.1+)
Cyni Toolbox
Cytoscape Network Inference Toolbox puts together several tools that allow infering networks from bio data (For Cytoscape 3.1+)
(25) 17758 downloads
Rene
Regulatory Network Enhancing Plugin - ReNE allows users to enhance standard KEGG/Reactome pathways wit
Rene
Regulatory Network Enhancing Plugin - ReNE allows users to enhance standard KEGG/Reactome pathways wit
(12) 26445 downloads
CyDataSeries
Add time series and the like to your networks.
CyDataSeries
Add time series and the like to your networks.
(1) 5827 downloads
cyTransFinder
Signal Transduction Pathway Finder
cyTransFinder
Signal Transduction Pathway Finder
(3) 17397 downloads
Unsupported Plugins for Cytoscape 2.x
