Cytoscape App Store - Srikanth Bezawada

Apps

	Adj Exporter
	Cytoscape app that enables AdjacencyMatrixExport formats for directed & undirected networks

	Adj Exporter
	Cytoscape app that enables AdjacencyMatrixExport formats for directed & undirected networks
	(12) 10320 downloads

	CycleDetector
	Detects Cycles in a Cytoscape network

	CycleDetector
	Detects Cycles in a Cytoscape network
	(0) 2980 downloads

	CyLinkPredictor
	Link Predictor Based on Common Neighbors

	CyLinkPredictor
	Link Predictor Based on Common Neighbors
	(3) 1983 downloads

	Mclique
	Maximal Cliques in a given Cytoscape network, sorted by size

	Mclique
	Maximal Cliques in a given Cytoscape network, sorted by size
	(15) 9838 downloads

	PCM
	Assemble Predicted Clusters For better Proteins Cluster Detection

	PCM
	Assemble Predicted Clusters For better Proteins Cluster Detection
	(4) 2015 downloads

	PEWCC
	Detect dense sub-network (e.g. protein/gene complexes) in network (e.g. PPI/gene network)

	PEWCC
	Detect dense sub-network (e.g. protein/gene complexes) in network (e.g. PPI/gene network)
	(8) 2684 downloads

	CompleteGraph
	Creates a new fully connected Cytoscape network of given size

	CompleteGraph
	Creates a new fully connected Cytoscape network of given size
	(6) 3419 downloads

	CyIsomorphism
	All possible subgraph isomorphisms

	CyIsomorphism
	All possible subgraph isomorphisms
	(4) 3990 downloads

	CySpanningTree
	Spanning tree computation and MST heuristic for Travelling Salesman Problem

	CySpanningTree
	Spanning tree computation and MST heuristic for Travelling Salesman Problem
	(5) 5303 downloads

	NetworksInfo-writer
	Writes information about all networks of control panel in a .csv file

	NetworksInfo-writer
	Writes information about all networks of control panel in a .csv file
	(0) 2395 downloads

	PEmeasure
	Compute links weights and assess the reliability of the links in a network (e.g. protein-protein interactions)

	PEmeasure
	Compute links weights and assess the reliability of the links in a network (e.g. protein-protein interactions)
	(10) 2883 downloads

	TieDIE
	Tied Diffusion Through Interacting Events

	TieDIE
	Tied Diffusion Through Interacting Events
	(1) 4081 downloads