Uses of Class
idare.imagenode.internal.DataManagement.NodeManager

Packages that use NodeManager

Package	Description
idare.imagenode.internal
idare.imagenode.internal.GUI.DataSetController
idare.imagenode.internal.GUI.Legend
idare.imagenode.internal.GUI.Legend.Tasks
idare.imagenode.internal.GUI.NetworkSetup.Tasks
idare.imagenode.internal.ImageManagement
idare.imagenode.internal.Layout.Manual.GUI
idare.imagenode.internal.VisualStyle
idare.Properties	This package contains Properties and Static Variables used in multiple parts of the IDARE App.

Uses of NodeManager in idare.imagenode.internal

Methods in idare.imagenode.internal that return NodeManager

Modifier and Type	Method and Description
NodeManager	IDAREImageNodeApp.getNodeManager() Get the NodeManager created by this App

Uses of NodeManager in idare.imagenode.internal.GUI.DataSetController

Constructors in idare.imagenode.internal.GUI.DataSetController with parameters of type NodeManager

Constructor and Description
CreateNodesTaskFactory(NodeManager nodeManager, DataSetControlPanel builder, org.cytoscape.work.swing.DialogTaskManager dtm) Default constructor with a TaskManager that can handle the created tasks, the NodeManager to generate the Layouts and the DataSetControlPanel to obtain the layoutinformation from.

Uses of NodeManager in idare.imagenode.internal.GUI.Legend

Constructors in idare.imagenode.internal.GUI.Legend with parameters of type NodeManager

Constructor and Description
IDARELegend(JPanel ContentPane, NodeManager manager) Default constructor given a ContentPane to wrap this scrollerpane around and the NodeManager to obtain layouts for updated nodes.
LegendUpdater(IDARELegend target, NodeManager nm, org.cytoscape.application.CyApplicationManager appmgr, org.cytoscape.view.vizmap.VisualMappingManager vmm, StyleManager mgr) Default contstructor using the target IDARELegend, the NodeManager to check whether there are layouts for the node, The Style Manager to determine, whether a Style is using ImageNodes and Cytoscape managers to deterine the properties of visual styles and nodes.

Uses of NodeManager in idare.imagenode.internal.GUI.Legend.Tasks

Constructors in idare.imagenode.internal.GUI.Legend.Tasks with parameters of type NodeManager

Constructor and Description
CreateNodeImagesTaskFactory(org.cytoscape.util.swing.FileUtil util, IDARELegend legend, NodeManager manager, org.cytoscape.application.swing.CySwingApplication cySwingApp)
CreateNodeImageTask(IDARELegend legend, File targetFile, NodeManager manager, String FileExtension) Default Constructor

Uses of NodeManager in idare.imagenode.internal.GUI.NetworkSetup.Tasks

Fields in idare.imagenode.internal.GUI.NetworkSetup.Tasks declared as NodeManager

Modifier and Type	Field and Description
NodeManager	NetworkSetupProperties.nm

Constructors in idare.imagenode.internal.GUI.NetworkSetup.Tasks with parameters of type NodeManager

Constructor and Description
NetworkSetupGUIHandler(Field field, Object instance, org.cytoscape.work.Tunable tunable, IDARESettingsManager mgr, NodeManager nm, org.cytoscape.model.CyNetwork network)
NetworkSetupGUIHandler(Method getter, Method setter, Object instance, org.cytoscape.work.Tunable tunable, IDARESettingsManager mgr, NodeManager nm, org.cytoscape.model.CyNetwork network)
NetworkSetupGUIHandlerFactory(NodeManager nmgr, IDARESettingsManager idmgr, org.cytoscape.application.CyApplicationManager appmgr)

Uses of NodeManager in idare.imagenode.internal.ImageManagement

Methods in idare.imagenode.internal.ImageManagement with parameters of type NodeManager

Modifier and Type	Method and Description
void	ActiveNodeManager.setNodeManager(NodeManager nm)
void	ImageStorage.setNodeManager(NodeManager nm) Set the NodeManager linked to this ImageStorage

Uses of NodeManager in idare.imagenode.internal.Layout.Manual.GUI

Constructors in idare.imagenode.internal.Layout.Manual.GUI with parameters of type NodeManager

Constructor and Description
ManualLayoutUpdater(ManualLayout layout, IDARELegend legend, LayoutGUI gui, NodeManager nm)

Uses of NodeManager in idare.imagenode.internal.VisualStyle

Constructors in idare.imagenode.internal.VisualStyle with parameters of type NodeManager

Constructor and Description
IDAREDependentMapper(String MappedColumnName, org.cytoscape.view.model.VisualProperty<S> vp, NodeManager nm, S mappedValue) Standard constructor of the Mapper
IDAREVisualStyle(org.cytoscape.view.vizmap.VisualStyleFactory visualStyleFactoryServiceRef, org.cytoscape.view.vizmap.VisualMappingManager vmmServiceRef, org.cytoscape.view.vizmap.VisualMappingFunctionFactory vmfFactoryD, org.cytoscape.view.vizmap.VisualMappingFunctionFactory vmfFactoryP, org.cytoscape.event.CyEventHelper eventHelper, ImageStorage imf, org.cytoscape.view.model.CyNetworkViewManager cyNetViewMgr, NodeManager idm, ActiveNodeManager anm) Create a new Visual Style and Activator.
StyleManager(ImageStorage imf, org.cytoscape.view.vizmap.VisualMappingManager vmmServiceRef, org.cytoscape.view.model.CyNetworkViewManager cyNetViewMgr, org.cytoscape.event.CyEventHelper eventHelper, NodeManager nm, org.cytoscape.application.CyApplicationManager cyAppMgr, ActiveNodeManager anm) Default Constructor.

Uses of NodeManager in idare.Properties

Methods in idare.Properties with parameters of type NodeManager

Modifier and Type	Method and Description
static void	IDARESettingsManager.SetNetworkData(org.cytoscape.model.CyNetwork network, IDARESettingsManager IDAREIdmgr, String NodeTypeCol, String IDCol, boolean overwrite, NodeManager nm) Set up the provided network using the Provided IDCol for the IDARE Names and the NodeTypesCol for the IDARE Node Types