| idare.imagenode |
This package contains the Service of the IDAREApp that allows the addition of plugins to the app.
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| idare.imagenode.ColorManagement |
This Package contains classes used for Displaying and defining ColorMaps available in IDARE. |
| idare.imagenode.ColorManagement.ColorMapTypes |
This Package contains the ColorMapTypes available in IDARE.
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| idare.imagenode.Data.BasicDataTypes.ArrayData |
This package contains the basic Dataset assuming that the data consists of one sheet
of information.
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| idare.imagenode.Data.BasicDataTypes.MultiArrayData |
This package contains the a Dataset specification for datasets with multiple sheets of containing multiple related sets of information..
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| idare.imagenode.exceptions.io |
This Package contains exceptions supposed to be thrown, when problems during data parsing occur.
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| idare.imagenode.exceptions.layout |
This Package contains exceptions supposed to be thrown, when problems during layouting occur.
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| idare.imagenode.GUI.Legend.Utilities |
This package contains classes for use with the IDARELegend.
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| idare.imagenode.Interfaces.DataSetReaders |
A Package that defines interfaces that have to be used by Readers for additional DataSet Formats.
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| idare.imagenode.Interfaces.DataSetReaders.WorkBook |
This package contains the Interfaces necessary for DataSet parsing.
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| idare.imagenode.Interfaces.DataSetReaders.WorkBook.BasicImplementation |
This package contains a basic implementation of an IDAREWorkbook compatible with the IDARE Interface. |
| idare.imagenode.Interfaces.DataSets |
A Package that defines interfaces and abstract basis classes for all components necessary to represent a DataSet. |
| idare.imagenode.Interfaces.Layout |
A Package that defines interfaces and abstract basis classes for all components necessary to generate a Layout for n individual DataSet
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| idare.imagenode.Interfaces.Plugin |
A Package that defines interfaces hich have to be implemented by Plugins to Cytoscape.
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| idare.imagenode.internal |
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| idare.imagenode.internal.ColorManagement.ColorScales |
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| idare.imagenode.internal.Data.Array.CircleData |
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| idare.imagenode.internal.Data.Array.CircleGridData |
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| idare.imagenode.internal.Data.Array.RectangleData |
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| idare.imagenode.internal.Data.Array.TimeSeriesData |
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| idare.imagenode.internal.Data.MultiArray.GraphData |
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| idare.imagenode.internal.Data.MultiArray.IndividualGraph |
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| idare.imagenode.internal.Data.MultiArray.ScatterData |
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| idare.imagenode.internal.DataManagement |
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| idare.imagenode.internal.DataManagement.Events |
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| idare.imagenode.internal.DataSetReaders |
This package contains Readers for Excel and CSV File formats implementing the IDAREDatasetReader interface |
| idare.imagenode.internal.DataSetReaders.CSVReader |
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| idare.imagenode.internal.DataSetReaders.POIReader |
This package contains a wrapper to wrap POI Workbooks to IDAREWorkbooks |
| idare.imagenode.internal.Debug |
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| idare.imagenode.internal.exceptions.debug |
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| idare.imagenode.internal.GUI.DataSetAddition |
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| idare.imagenode.internal.GUI.DataSetAddition.Tasks |
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| idare.imagenode.internal.GUI.DataSetController |
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| idare.imagenode.internal.GUI.Legend |
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| idare.imagenode.internal.GUI.Legend.Tasks |
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| idare.imagenode.internal.GUI.NetworkSetup |
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| idare.imagenode.internal.GUI.NetworkSetup.Tasks |
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| idare.imagenode.internal.ImageManagement |
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| idare.imagenode.internal.Layout |
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| idare.imagenode.internal.Layout.Automatic |
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| idare.imagenode.internal.Layout.io |
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| idare.imagenode.internal.Layout.Manual |
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| idare.imagenode.internal.Layout.Manual.GUI |
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| idare.imagenode.internal.Layout.Manual.GUI.Tasks |
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| idare.imagenode.internal.Layout.Manual.Utilities |
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| idare.imagenode.internal.Services |
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| idare.imagenode.internal.Services.JSBML |
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| idare.imagenode.internal.Services.POI |
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| idare.imagenode.internal.VisualStyle |
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| idare.imagenode.internal.VisualStyle.Tasks |
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| idare.imagenode.Properties |
This package contains Properties and Static Variables used in the ImageNode Generation App.
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| idare.imagenode.Utilities |
This package contains simple helper functions and functionalities that might be useful e.g.
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| idare.imagenode.Utilities.GUI |
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| idare.internal |
This package contains the basic app object that is available to all parts of the app.
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| idare.NodeDuplicator.Internal |
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| idare.NodeDuplicator.Internal.Tasks |
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| idare.Properties |
This package contains Properties and Static Variables used in multiple parts of the IDARE App.
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| idare.sbmlannotator.internal |
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| idare.sbmlannotator.internal.gpr |
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| idare.sbmlannotator.internal.Tasks |
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| idare.subnetwork.internal |
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| idare.subnetwork.internal.GUI |
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| idare.subnetwork.internal.Tasks |
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| idare.subnetwork.internal.Tasks.propertySelection |
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| idare.subnetwork.internal.Tasks.SubsystemGeneration |
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| idare.ThirdParty |
This package contains Classes and Code obtained from third party sites.
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