Protein (IDARE [idare] 1.0 API)

Constructors
Constructor and Description
`Protein(HashMap<String,String> databaseids)`
`Protein(String name, String database)`

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`addAltName(String name, String database)`
`void`	`addAltNames(HashMap<String,String> altnames)`
`boolean`	`equals(Object o)`
`Set<Gene>`	`getCodingGenes()`
`String`	`getDataBaseName(String databasename)`
`String`	`getName()`
`String`	`getName(String Database)`
`int`	`hashCode()`
`boolean`	`hasName(String name, String database)`
`boolean`	`isSetName()`
`GPRAssociation`	`setCodingGenes(Set<Gene> genes, GPRManager gm)`
`void`	`setName(String name, String Database)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

public Protein(HashMap<String,String> databaseids)

public Protein(String name,
               String database)

public void addAltNames(HashMap<String,String> altnames)

public void addAltName(String name,
                       String database)

public boolean hasName(String name,
                       String database)

public GPRAssociation setCodingGenes(Set<Gene> genes,
                                     GPRManager gm)

public String getName(String Database)

public void setName(String name,
                    String Database)

public String getDataBaseName(String databasename)

Class Protein