cyTransFinder

Class NetworkReactomeTask

java.lang.Object

org.cytoscape.work.AbstractTask

cyTransFinder.NetworkReactomeTask

All Implemented Interfaces:

org.cytoscape.work.Task

public class NetworkReactomeTask
extends org.cytoscape.work.AbstractTask

Field Summary

Fields

Modifier and Type	Field and Description
protected CyActivator	myActivator
protected BufferedInputStream	myBis

Fields inherited from class org.cytoscape.work.AbstractTask

cancelled

Constructor Summary

Constructors

Constructor and Description
NetworkReactomeTask(BufferedInputStream BIS, CyActivator myActivator)

Method Summary

Modifier and Type	Method and Description
org.cytoscape.model.CyNetwork[]	getNetList()
void	run(org.cytoscape.work.TaskMonitor taskMonitor)

Methods inherited from class org.cytoscape.work.AbstractTask

cancel, insertTasksAfterCurrentTask, insertTasksAfterCurrentTask, setTaskIterator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

myBis

protected BufferedInputStream myBis

myActivator

protected CyActivator myActivator

Constructor Detail

NetworkReactomeTask

public NetworkReactomeTask(BufferedInputStream BIS,
                           CyActivator myActivator)

Method Detail

run

public void run(org.cytoscape.work.TaskMonitor taskMonitor)
         throws Exception

Specified by:

run in interface org.cytoscape.work.Task

Specified by:

run in class org.cytoscape.work.AbstractTask

Throws:

Exception

getNetList

public org.cytoscape.model.CyNetwork[] getNetList()