Categories: clustering, graph analysis

CytoKavosh is a Cytoscape plug-in which allows discovering network motifs with less memory and CPU time in comparison with other existing tools. CytoKavosh plug-in uses Kavosh algorithm for finding network motifs and is based on counting all k-size sub-graphs of a given network graph (directed or undirected).

Authors:

• Ali Masoudi-Nejad (Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Iran)
• Mitra Ansariola (Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Iran)
• Zahra Razaghi (Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Iran)
• Ali Salehzadeh-Yazdi (Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Iran)
• Sahand Khakabimamaghani (Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Iran)