Bridging Cytoscape with R
**Cyrface - [ webpage]** **Cyrface** establishes an interface between **R** and **Cytoscape** by using different Java-R libraries, e.g. Rserve, RCaller. Cyrface can be used as a Cytoscape plug-in, e.g. to run R commands within Cytoscape, or used as a library to allow your plug-in to connect to R. ### Related Packages, Apps and Modules Note that **Cyrface** works with **Cytoscape v2**. There is no **Cytoscape v3** app that allows callouts to **R** libraries. However, the [cyREST app]( does allow **R** applications (e.g., RStudio) to invoke **Cytoscape v3** services via the [RCy3 package]( Separately, the [RCyjs package]( can be used to display Cytoscape-like graphs in a web browser from within an R session.


Works with Cytoscape 3.1

API   pom.xml   Javadocs


Version 2.0.0

Released 8 May 2014

Works with Cytoscape 3.1

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