Cy3D is a simple 3D network renderer App for Cytoscape.
<li>Create 3D network views.</li>
<li>Rotate and zoom networks easily with the mouse.</li>
<li>Supports many visual style properties.</li>
<li>Provides 3D-enabled layouts, including a 3D force-directed layout</li>
[https://cy3d.readthedocs.io/en/latest/UserGuide.html Cy3D User Guide]
**Note:** Cy3D is no longer being actively maintained. It may not work on all platforms.