Submit an App
Submit a 3.0 App
Guide to 3.0 App Development
Sign In
All Apps
Categories
collections
(4)
data visualization
(75)
network generation
(58)
graph analysis
(54)
network analysis
(52)
online data import
(46)
automation
(43)
integrated analysis
(38)
clustering
(34)
utility
(31)
systems biology
(31)
enrichment analysis
(29)
visualization
(28)
data integration
(28)
layout
(21)
annotation
(21)
core app
(20)
ontology analysis
(18)
pathway database
(17)
network comparison
(17)
local data import
(17)
import
(17)
gene expression
(16)
functional analysis
(16)
scripting
(13)
interaction database
(13)
PPI-network
(12)
GO annotation
(12)
regulatory networks
(11)
Network structure
(11)
network dynamics
(11)
network inference
(10)
heat map visualization
(9)
export
(9)
Topology
(8)
network manipulation
(8)
gene regulation
(8)
functional module detection
(8)
disease
(8)
attribute generation
(8)
animation
(8)
networks
(7)
linked data
(7)
ID mapping
(7)
gene-disease association
(7)
database
(7)
centrality analysis
(7)
cancer data analysis
(7)
simulation
(6)
network partitioning
(6)
network learning
(6)
molecular structure
(6)
microarrays
(6)
grouping
(6)
social network analysis
(5)
Random walk with restart algorithm
(5)
R
(5)
Protein complex
(5)
Pathway finding
(5)
pathway
(5)
literature mining
(5)
data manipulation
(5)
Connection sub-graph discovery
(5)
structural biology
(4)
SPARQL
(4)
set analysis
(4)
sequence similarity
(4)
network alignment
(4)
JavaScript
(4)
Gene prioritization
(4)
gene function prediction
(4)
gene co-expression
(4)
signaling
(3)
set visualization
(3)
search
(3)
SBML
(3)
network repository
(3)
kegg
(3)
inference
(3)
disease-disease association
(3)
cluster visualization
(3)
bayesian networks
(3)
Pathway finding
Search for posts about Pathway finding →
Ask a question about Pathway finding →
cyTransFinder
Signal Transduction Pathway Finder
cyTransFinder
Signal Transduction Pathway Finder
(2) 9038 downloads
PathLinker
Reconstructs signaling pathways from protein interaction networks
PathLinker
Reconstructs signaling pathways from protein interaction networks
(13) 9185 downloads
Strongest Path
An application for protein-protein interaction analysis
Strongest Path
An application for protein-protein interaction analysis
(6) 4081 downloads
KeyPathwayMiner
Detects highly-connected sub-networks where most genes show similar expression behavior.
KeyPathwayMiner
Detects highly-connected sub-networks where most genes show similar expression behavior.
(70) 13526 downloads
Pesca3.0
Pesca3.0
(6) 2742 downloads
Unsupported Plugins for Cytoscape 2.x
