vn.edu.tlu.hatrang.autoRWRMTN.internal.task

Class SelectDiseaseTask

java.lang.Object

org.cytoscape.work.AbstractTask

vn.edu.tlu.hatrang.autoRWRMTN.internal.task.SelectDiseaseTask

All Implemented Interfaces:

org.cytoscape.work.ObservableTask, org.cytoscape.work.Task

public class SelectDiseaseTask
extends org.cytoscape.work.AbstractTask
implements org.cytoscape.work.ObservableTask

Field Summary

Fields

Modifier and Type	Field and Description
org.cytoscape.work.util.ListSingleSelection<Float>	backProb
org.cytoscape.work.util.ListSingleSelection<String>	candidateOption
org.cytoscape.work.util.ListSingleSelection<String>	diseaseName
File	miRNAFile
String	miRNAList
ArrayList<RankedResult>	result
org.cytoscape.work.util.ListSingleSelection<Float>	subnetWeight

Constructor Summary

Constructors

Constructor and Description
SelectDiseaseTask(org.cytoscape.model.CyNetworkFactory networkFactory, org.cytoscape.model.CyNetworkManager networkManager, org.cytoscape.model.CyNetwork network, MyUtils myUtils)

Method Summary

Modifier and Type	Method and Description
static String	getJson(ArrayList<RankedResult> listresult)
List<Class<?>>	getResultClasses()
<R> R	getResults(Class<? extends R> type)
String	getTitle()
void	run(org.cytoscape.work.TaskMonitor arg0)

Methods inherited from class org.cytoscape.work.AbstractTask

cancel, getTaskIterator, setTaskIterator

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.cytoscape.work.Task

cancel

Field Detail

result

public ArrayList<RankedResult> result

diseaseName

public org.cytoscape.work.util.ListSingleSelection<String> diseaseName

candidateOption

public org.cytoscape.work.util.ListSingleSelection<String> candidateOption

miRNAFile

public File miRNAFile

miRNAList

public String miRNAList

backProb

public org.cytoscape.work.util.ListSingleSelection<Float> backProb

subnetWeight

public org.cytoscape.work.util.ListSingleSelection<Float> subnetWeight

Constructor Detail

SelectDiseaseTask

public SelectDiseaseTask(org.cytoscape.model.CyNetworkFactory networkFactory,
                         org.cytoscape.model.CyNetworkManager networkManager,
                         org.cytoscape.model.CyNetwork network,
                         MyUtils myUtils)

Method Detail

run

public void run(org.cytoscape.work.TaskMonitor arg0)
         throws IOException

Specified by:

run in interface org.cytoscape.work.Task

Specified by:

run in class org.cytoscape.work.AbstractTask

Throws:

IOException

getTitle

public String getTitle()

getJson

public static String getJson(ArrayList<RankedResult> listresult)

getResults

public <R> R getResults(Class<? extends R> type)

Specified by:

getResults in interface org.cytoscape.work.ObservableTask

getResultClasses

public List<Class<?>> getResultClasses()

Specified by:

getResultClasses in interface org.cytoscape.work.ObservableTask