com.dpgil.pathlinker.path_linker.internal.rest

Class PathLinkerImpl

java.lang.Object

com.dpgil.pathlinker.path_linker.internal.rest.PathLinkerImpl

All Implemented Interfaces:

PathLinkerResource

public class PathLinkerImpl
extends Object
implements PathLinkerResource

Implementation of the PathLinkerResource interface

Constructor Summary

Constructors

Constructor and Description

PathLinkerImpl(PathLinkerControlPanel controlPanel, org.cytoscape.application.CyApplicationManager cyApplicationManager, org.cytoscape.model.CyNetworkManager cyNetworkManager, org.cytoscape.app.CyAppAdapter adapter, org.cytoscape.service.util.CyServiceRegistrar serviceRegistrar, org.cytoscape.application.swing.CySwingApplication cySwingApp, org.cytoscape.ci.CIExceptionFactory ciExceptionFactory) Default constructor

Method Summary

Modifier and Type	Method and Description
javax.ws.rs.core.Response	run(long networkSUID, PathLinkerModelParams modelParams) Implementation of run method from PathLinkerResource Runs algorithm on the input network SUID and user parameters
javax.ws.rs.core.Response	run(PathLinkerModelParams modelParams) Implementation of run method from PathLinkerResource Runs algorithm on the currently selected network and user parameters

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PathLinkerImpl

public PathLinkerImpl(PathLinkerControlPanel controlPanel,
                      org.cytoscape.application.CyApplicationManager cyApplicationManager,
                      org.cytoscape.model.CyNetworkManager cyNetworkManager,
                      org.cytoscape.app.CyAppAdapter adapter,
                      org.cytoscape.service.util.CyServiceRegistrar serviceRegistrar,
                      org.cytoscape.application.swing.CySwingApplication cySwingApp,
                      org.cytoscape.ci.CIExceptionFactory ciExceptionFactory)

Default constructor

Parameters:

controlPanel - the PathLinkerControlPanel

cyApplicationManager - application manager

cyNetworkManager - network manager

adapter - app adapter

serviceRegistrar - service registrar

cySwingApp - swing app

ciExceptionFactory - CIException factory

Method Detail

run

public javax.ws.rs.core.Response run(long networkSUID,
                                     PathLinkerModelParams modelParams)

Implementation of run method from PathLinkerResource Runs algorithm on the input network SUID and user parameters

Specified by:

run in interface PathLinkerResource

Parameters:

networkSUID - the SUID of the network to run PathLinker

modelParams - user inputs

Returns:

appropriate JSON response on the result

run

public javax.ws.rs.core.Response run(PathLinkerModelParams modelParams)

Implementation of run method from PathLinkerResource Runs algorithm on the currently selected network and user parameters

Specified by:

run in interface PathLinkerResource

Parameters:

modelParams - user inputs

Returns:

appropriate JSON response on the result