public class PathLinkerModelParams extends Object
Modifier and Type | Field and Description |
---|---|
boolean |
allowSourcesTargetsInPaths |
Double |
edgePenalty |
String |
edgeWeightColumnName |
EdgeWeightType |
edgeWeightType |
boolean |
includeTiedPaths |
Integer |
k |
Boolean |
skipSubnetworkGeneration |
String |
sources |
String |
targets |
Constructor and Description |
---|
PathLinkerModelParams() |
Modifier and Type | Method and Description |
---|---|
boolean |
continueStatus()
Getter method of quit
|
Map<org.cytoscape.model.CyNode,String> |
getCyNodeToId()
Getter method of cyNodeToId
|
Set<String> |
getSourceNames()
Getter method of sourceNames
|
List<org.cytoscape.model.CyNode> |
getSourcesList()
Getter method of sourcesList
|
Set<String> |
getTargetNames()
Getter method of targetNames
|
List<org.cytoscape.model.CyNode> |
getTargetsList()
Getter method of targetsList
|
List<PathLinkerError> |
validate(org.cytoscape.model.CyNetwork network,
String resourcePath)
Validation of the model parameter on the give network
modify the model parameter object itself
and initialize/sets varies other properties
|
public String sources
public String targets
public Integer k
public EdgeWeightType edgeWeightType
public Double edgePenalty
public String edgeWeightColumnName
public boolean allowSourcesTargetsInPaths
public boolean includeTiedPaths
public Boolean skipSubnetworkGeneration
public Map<org.cytoscape.model.CyNode,String> getCyNodeToId()
public List<org.cytoscape.model.CyNode> getSourcesList()
public Set<String> getSourceNames()
public List<org.cytoscape.model.CyNode> getTargetsList()
public Set<String> getTargetNames()
public boolean continueStatus()
public List<PathLinkerError> validate(org.cytoscape.model.CyNetwork network, String resourcePath)
network
- the given network for validationresourcePath
- the resource path for error constructionCopyright © 2018. All rights reserved.