idare.sbmlannotator.internal

Class SBMLAnnotationTaskFactory

java.lang.Object

org.cytoscape.work.AbstractTaskFactory

idare.sbmlannotator.internal.SBMLAnnotationTaskFactory

All Implemented Interfaces:

org.cytoscape.task.NetworkViewTaskFactory, org.cytoscape.work.TaskFactory

public class SBMLAnnotationTaskFactory
extends org.cytoscape.work.AbstractTaskFactory
implements org.cytoscape.task.NetworkViewTaskFactory

Field Summary

Fields

Modifier and Type	Field and Description
protected org.cytoscape.application.CyApplicationManager	cyAppMgr
protected org.cytoscape.application.swing.CySwingApplication	cySwingApp
protected org.cytoscape.event.CyEventHelper	eventHelper
protected org.cytoscape.util.swing.FileUtil	fileutil

Constructor Summary

Constructors

Constructor and Description
SBMLAnnotationTaskFactory(org.cytoscape.application.CyApplicationManager applicationManager, org.cytoscape.event.CyEventHelper eventHelper, org.cytoscape.util.swing.FileUtil fileutil, org.cytoscape.application.swing.CySwingApplication cySwingApp, SBMLManagerHolder SBMLListener, IDAREImageNodeApp app)

Method Summary

Modifier and Type	Method and Description
org.cytoscape.work.TaskIterator	createTaskIterator()
org.cytoscape.work.TaskIterator	createTaskIterator(org.cytoscape.view.model.CyNetworkView arg0)
boolean	isReady()
boolean	isReady(org.cytoscape.view.model.CyNetworkView arg0)
protected void	readURIString(String URI, Set<String> URICollection, boolean database)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

cyAppMgr

protected org.cytoscape.application.CyApplicationManager cyAppMgr

eventHelper

protected org.cytoscape.event.CyEventHelper eventHelper

fileutil

protected final org.cytoscape.util.swing.FileUtil fileutil

cySwingApp

protected org.cytoscape.application.swing.CySwingApplication cySwingApp

Constructor Detail

SBMLAnnotationTaskFactory

public SBMLAnnotationTaskFactory(org.cytoscape.application.CyApplicationManager applicationManager,
                                 org.cytoscape.event.CyEventHelper eventHelper,
                                 org.cytoscape.util.swing.FileUtil fileutil,
                                 org.cytoscape.application.swing.CySwingApplication cySwingApp,
                                 SBMLManagerHolder SBMLListener,
                                 IDAREImageNodeApp app)

Method Detail

createTaskIterator

public org.cytoscape.work.TaskIterator createTaskIterator()

Specified by:

createTaskIterator in interface org.cytoscape.work.TaskFactory

isReady

public boolean isReady()

Specified by:

isReady in interface org.cytoscape.work.TaskFactory

Overrides:

isReady in class org.cytoscape.work.AbstractTaskFactory

createTaskIterator

public org.cytoscape.work.TaskIterator createTaskIterator(org.cytoscape.view.model.CyNetworkView arg0)

Specified by:

createTaskIterator in interface org.cytoscape.task.NetworkViewTaskFactory

isReady

public boolean isReady(org.cytoscape.view.model.CyNetworkView arg0)

Specified by:

isReady in interface org.cytoscape.task.NetworkViewTaskFactory

readURIString

protected void readURIString(String URI,
                             Set<String> URICollection,
                             boolean database)