public class GeneEnrichmentTask extends AbstractEnrichmentTask
Modifier and Type | Field and Description |
---|---|
org.cytoscape.work.util.ListSingleSelection<Callable<org.cytoscape.model.CyColumn>> |
columnNames |
Integer |
minNumGenes |
boolean |
newNetwork |
double |
pvalueThreshold |
org.cytoscape.work.util.ListSingleSelection<String> |
sources |
org.cytoscape.work.util.ListSingleSelection<String> |
typeId |
Constructor and Description |
---|
GeneEnrichmentTask(org.cytoscape.view.model.CyNetworkView cyNetworkView) |
Modifier and Type | Method and Description |
---|---|
void |
run(org.cytoscape.work.TaskMonitor taskMonitor) |
getConn, getCurrNetwork, getEnrichList, listNodeColumnsNames, openConnection, setUrlParams
public org.cytoscape.work.util.ListSingleSelection<Callable<org.cytoscape.model.CyColumn>> columnNames
public org.cytoscape.work.util.ListSingleSelection<String> sources
public org.cytoscape.work.util.ListSingleSelection<String> typeId
public boolean newNetwork
public double pvalueThreshold
public Integer minNumGenes
public GeneEnrichmentTask(org.cytoscape.view.model.CyNetworkView cyNetworkView)
public void run(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
run
in interface org.cytoscape.work.Task
run
in class AbstractEnrichmentTask
Exception
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