public class AutomationVariantEnrichmentTask extends AbstractEnrichmentTask implements org.cytoscape.work.ObservableTask
Modifier and Type | Field and Description |
---|---|
String |
columnName |
Integer |
minNumVariants |
boolean |
newNetwork |
double |
pvalueThreshold |
String |
source |
String |
typeId |
String |
universe |
Constructor and Description |
---|
AutomationVariantEnrichmentTask(org.cytoscape.view.model.CyNetworkView cyNetworkView,
Long selectedNetwork,
String columnName,
String source,
String typeId,
String universe,
boolean newNetwork,
double pvalueThreshold,
Integer minNumVariants) |
Modifier and Type | Method and Description |
---|---|
List<Class<?>> |
getResultClasses() |
<R> R |
getResults(Class<? extends R> type) |
void |
run(org.cytoscape.work.TaskMonitor taskMonitor) |
getConn, getCurrNetwork, getEnrichList, listNodeColumnsNames, openConnection, setUrlParams
cancel, getTaskIterator, insertTasksAfterCurrentTask, insertTasksAfterCurrentTask, setTaskIterator
public String columnName
public String source
public String typeId
public String universe
public boolean newNetwork
public double pvalueThreshold
public Integer minNumVariants
public void run(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
run
in interface org.cytoscape.work.Task
run
in class AbstractEnrichmentTask
Exception
public <R> R getResults(Class<? extends R> type)
getResults
in interface org.cytoscape.work.ObservableTask
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