es.imim.DisGeNET.internal.tables

Class DisGeNetCyTableBase

java.lang.Object

es.imim.DisGeNET.internal.tables.DisGeNetCyTableBase

All Implemented Interfaces:

DisGeNETCyTableNodeInterface

public class DisGeNetCyTableBase
extends Object
implements DisGeNETCyTableNodeInterface

Class that loads all the data for the table networks.

Author:

jsauch

Constructor Summary

Constructors

Constructor and Description
DisGeNetCyTableBase()
DisGeNetCyTableBase(GuiParameters params)

Method Summary

Modifier and Type	Method and Description
void	addEdgeColumns(org.cytoscape.model.CyTable cyTable)
void	addNodeColumns(org.cytoscape.model.CyTable cyTable)
void	createGdaEdgeColumns(org.cytoscape.model.CyTable cyTable)
void	createVdaEdgeColumns(org.cytoscape.model.CyTable cyTable)
void	fillEdgeColumns(org.cytoscape.model.CyNetwork cyNetwork, Map<org.cytoscape.model.CyEdge,Map<String,Object>> edgeAttributes)
void	fillNodeColumns(org.cytoscape.model.CyTable cyTable, Map<String,Long> attributes)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DisGeNetCyTableBase

public DisGeNetCyTableBase()

DisGeNetCyTableBase

public DisGeNetCyTableBase(GuiParameters params)

Method Detail

addNodeColumns

public void addNodeColumns(org.cytoscape.model.CyTable cyTable)

Specified by:

addNodeColumns in interface DisGeNETCyTableNodeInterface

addEdgeColumns

public void addEdgeColumns(org.cytoscape.model.CyTable cyTable)

Specified by:

addEdgeColumns in interface DisGeNETCyTableNodeInterface

fillNodeColumns

public void fillNodeColumns(org.cytoscape.model.CyTable cyTable,
                            Map<String,Long> attributes)
                     throws DisGeNetException

Specified by:

fillNodeColumns in interface DisGeNETCyTableNodeInterface

Throws:

DisGeNetException

fillEdgeColumns

public void fillEdgeColumns(org.cytoscape.model.CyNetwork cyNetwork,
                            Map<org.cytoscape.model.CyEdge,Map<String,Object>> edgeAttributes)

Specified by:

fillEdgeColumns in interface DisGeNETCyTableNodeInterface

createGdaEdgeColumns

public void createGdaEdgeColumns(org.cytoscape.model.CyTable cyTable)

createVdaEdgeColumns

public void createVdaEdgeColumns(org.cytoscape.model.CyTable cyTable)