es.imim.DisGeNET.gui

Class GuiParameters<PostTranslational_Modification,Altered_Expression>

java.lang.Object

es.imim.DisGeNET.gui.GuiParameters<PostTranslational_Modification,Altered_Expression>

Type Parameters:

PostTranslational_Modification -

Altered_Expression -

public class GuiParameters<PostTranslational_Modification,Altered_Expression>
extends Object

this class handles all the settings from the gui panel and is used to hand them over to the functions that create the networks

Author:

michael

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	GuiParameters.associationValues
static class	GuiParameters.diseaseClassValues
static class	GuiParameters.sourceValues

Field Summary

Fields

Modifier and Type	Field and Description
static GuiParameters.associationValues	Fusion_Gene

Constructor Summary

Constructors

Constructor and Description
GuiParameters()

Method Summary

Methods

Modifier and Type	Method and Description
String	getActiveTab()
String	getCurrentSelectedDisClass()
String	getCurrentSelectedSource()
DisGeNETVisualStyle	getDisGeNETvisualStyle()
String	getDisProjDisClass()
String	getDisProjSource()
String	getDisSearchText()
String	getGenDis_DisClass()
String	getGenDisAssociationType()
String	getGenDisDisSearchText()
String	getGenDisGenSearchText()
String	getGenDisLowScore()
String	getGenDisSource()
String	getGenDisUpScore()
String	getGenProjDisClass()
String	getGenProjSource()
String	getGenSearchText()
String	getNetworkName()
String	getVarDis_DisClass()
String	getVarDisAssociationType()
String	getVarDisDisSearchText()
String	getVarDisLowScore()
String	getVarDisSource()
String	getVarDisUpScore()
String	getVarDisVarSearchText()
String	getVarSearchText()
boolean	isEmptyNet()
boolean	isNetBuildInterrupted()
void	setActiveTab(String activeTab)
void	setDisGeNETvisualStyle(DisGeNETVisualStyle disGeNETvisualStyle)
void	setDisProjDisClass(String disProjDisClass)
void	setDisProjSource(String disProjSource)
void	setDisSearchText(String disSearchText)
void	setEmptyNet(boolean emptyNet)
void	setGenDis_DisClass(String genDisDisClass)
void	setGenDisAssociationType(String genDisAssociationType)
void	setGenDisDisSearchText(String search_text)
void	setGenDisGenSearchText(String search_text)
String	setGenDisLowScore(String score)
void	setGenDisSource(String genDisSource)
String	setGenDisUpScore(String score)
void	setGenProjDisClass(String genProjDisClass)
void	setGenProjSource(String genProjSource)
void	setGenSearchText(String genSearchText)
void	setNetBuildInterrupted(boolean netBuildInterrupted)
void	setNetworkName(String networkName)
void	setVarDis_DisClass(String varDisDisClass)
void	setVarDisAssociationType(String varDisAssociationType)
void	setVarDisDisSearchText(String varDisDisSearchText)
void	setVarDisLowScore(String varDis_Lowscore)
void	setVarDisSource(String varDisSource)
void	setVarDisUpScore(String varDis_Upscore)
void	setVarDisVarSearchText(String varDisVarSearchText)
void	setVarSearchText(String varSearchText)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

Fusion_Gene

public static final GuiParameters.associationValues Fusion_Gene

Constructor Detail

GuiParameters

public GuiParameters()

Method Detail

getGenDisUpScore

public String getGenDisUpScore()

getGenDisLowScore

public String getGenDisLowScore()

setGenDisUpScore

public String setGenDisUpScore(String score)

setGenDisLowScore

public String setGenDisLowScore(String score)

getVarDisLowScore

public String getVarDisLowScore()

setVarDisLowScore

public void setVarDisLowScore(String varDis_Lowscore)

getVarDisUpScore

public String getVarDisUpScore()

setVarDisUpScore

public void setVarDisUpScore(String varDis_Upscore)

getCurrentSelectedSource

public String getCurrentSelectedSource()

getGenDisSource

public String getGenDisSource()

setGenDisSource

public void setGenDisSource(String genDisSource)

getVarDisSource

public String getVarDisSource()

setVarDisSource

public void setVarDisSource(String varDisSource)

getDisProjSource

public String getDisProjSource()

setDisProjSource

public void setDisProjSource(String disProjSource)

getGenProjSource

public String getGenProjSource()

setGenProjSource

public void setGenProjSource(String genProjSource)

getGenDisAssociationType

public String getGenDisAssociationType()

setGenDisAssociationType

public void setGenDisAssociationType(String genDisAssociationType)

getVarDisAssociationType

public String getVarDisAssociationType()

setVarDisAssociationType

public void setVarDisAssociationType(String varDisAssociationType)

getCurrentSelectedDisClass

public String getCurrentSelectedDisClass()

getGenDis_DisClass

public String getGenDis_DisClass()

setGenDis_DisClass

public void setGenDis_DisClass(String genDisDisClass)

getVarDis_DisClass

public String getVarDis_DisClass()

setVarDis_DisClass

public void setVarDis_DisClass(String varDisDisClass)

getDisProjDisClass

public String getDisProjDisClass()

setDisProjDisClass

public void setDisProjDisClass(String disProjDisClass)

getGenProjDisClass

public String getGenProjDisClass()

setGenProjDisClass

public void setGenProjDisClass(String genProjDisClass)

getActiveTab

public String getActiveTab()

setActiveTab

public void setActiveTab(String activeTab)

getNetworkName

public String getNetworkName()

setNetworkName

public void setNetworkName(String networkName)

getGenSearchText

public String getGenSearchText()

setGenSearchText

public void setGenSearchText(String genSearchText)

getVarSearchText

public String getVarSearchText()

setVarSearchText

public void setVarSearchText(String varSearchText)

getDisSearchText

public String getDisSearchText()

setDisSearchText

public void setDisSearchText(String disSearchText)

getGenDisGenSearchText

public String getGenDisGenSearchText()

setGenDisGenSearchText

public void setGenDisGenSearchText(String search_text)

getGenDisDisSearchText

public String getGenDisDisSearchText()

setGenDisDisSearchText

public void setGenDisDisSearchText(String search_text)

getVarDisVarSearchText

public String getVarDisVarSearchText()

setVarDisVarSearchText

public void setVarDisVarSearchText(String varDisVarSearchText)

getVarDisDisSearchText

public String getVarDisDisSearchText()

setVarDisDisSearchText

public void setVarDisDisSearchText(String varDisDisSearchText)

setNetBuildInterrupted

public void setNetBuildInterrupted(boolean netBuildInterrupted)

isNetBuildInterrupted

public boolean isNetBuildInterrupted()

setDisGeNETvisualStyle

public void setDisGeNETvisualStyle(DisGeNETVisualStyle disGeNETvisualStyle)

getDisGeNETvisualStyle

public DisGeNETVisualStyle getDisGeNETvisualStyle()

setEmptyNet

public void setEmptyNet(boolean emptyNet)

isEmptyNet

public boolean isEmptyNet()