Serialized Form (be.svlandeg.diffany 1.0.0 API)

Package be.svlandeg.diffany.cytoscape
- Class be.svlandeg.diffany.cytoscape.InvalidRunConfigurationException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package be.svlandeg.diffany.cytoscape.actions
- Class be.svlandeg.diffany.cytoscape.actions.LoadExampleAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - services
```
Services services
```
    - exampleProject
```
Project exampleProject
```
    - runConfigurationID
```
int runConfigurationID
```
    - example
```
GenericExample example
```
- Class be.svlandeg.diffany.cytoscape.actions.RunProjectAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - model
```
Model model
```
- Class be.svlandeg.diffany.cytoscape.actions.UpdateVisualStyleAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable
  
  serialVersionUID:
  
  -8382501915601785381L
  - Serialized Fields
    - model
```
Model model
```
    - cyProject
```
CyProject cyProject
```
Package be.svlandeg.diffany.cytoscape.gui
- Class be.svlandeg.diffany.cytoscape.gui.EdgeFilterTableModel extends AbstractTableModel implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - columns
```
String[] columns
```
    - sourceInteractions
```
Map<K,V> sourceInteractions
```
    - diffInteractions
```
Map<K,V> diffInteractions
```
- Class be.svlandeg.diffany.cytoscape.gui.ExtraOptionsMenu extends JMenu implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - overlapOperatorGroup
```
ButtonGroup overlapOperatorGroup
```
    - minOperator
```
JRadioButtonMenuItem minOperator
```
    - maxOperator
```
JRadioButtonMenuItem maxOperator
```
    - appModel
```
Model appModel
```
      The model of the Diffany App
    - updateVizItem
```
JMenuItem updateVizItem
```
- Class be.svlandeg.diffany.cytoscape.gui.ModeDropDownModel extends AbstractListModel implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - selected
```
Model.ComparisonMode selected
```
- Class be.svlandeg.diffany.cytoscape.gui.ProjectDropDownModel extends AbstractListModel implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - empty
```
boolean empty
```
    - entries
```
List<E> entries
```
    - selectedEntry
```
CyProject selectedEntry
```
    - model
```
Model model
```
- Class be.svlandeg.diffany.cytoscape.gui.SelectionTableModel extends AbstractTableModel implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - networkEntries
```
List<E> networkEntries
```
      Networks to be listed in the selection list
    - entryMap
```
Map<K,V> entryMap
```
    - referenceRow
```
int referenceRow
```
    - columns
```
String[] columns
```
      Column headers
- Class be.svlandeg.diffany.cytoscape.gui.TabPane extends JPanel implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - model
```
Model model
```
    - collectionDropDown
```
JComboBox<E> collectionDropDown
```
    - collectionModel
```
ProjectDropDownModel collectionModel
```
    - networkTableModel
```
SelectionTableModel networkTableModel
```
    - runButton
```
JButton runButton
```
    - networkTable
```
JTable networkTable
```
    - requireRefNetCheckBox
```
JCheckBox requireRefNetCheckBox
```
    - supportSlider
```
JSlider supportSlider
```
    - filterEdgesTable
```
JTable filterEdgesTable
```
    - filterTableModel
```
EdgeFilterTableModel filterTableModel
```
    - hideNodesToggle
```
JCheckBox hideNodesToggle
```

Serialized Form

Package be.svlandeg.diffany.cytoscape

Class be.svlandeg.diffany.cytoscape.InvalidRunConfigurationException extends Exception implements Serializable

Package be.svlandeg.diffany.cytoscape.actions

Class be.svlandeg.diffany.cytoscape.actions.LoadExampleAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable

Serialized Fields

services

exampleProject

runConfigurationID

example

Class be.svlandeg.diffany.cytoscape.actions.RunProjectAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable

Serialized Fields

model

Class be.svlandeg.diffany.cytoscape.actions.UpdateVisualStyleAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable

Serialized Fields

model

cyProject

Package be.svlandeg.diffany.cytoscape.gui

Class be.svlandeg.diffany.cytoscape.gui.EdgeFilterTableModel extends AbstractTableModel implements Serializable

Serialized Fields

columns

sourceInteractions

diffInteractions

Class be.svlandeg.diffany.cytoscape.gui.ExtraOptionsMenu extends JMenu implements Serializable

Serialized Fields

overlapOperatorGroup

minOperator

maxOperator

appModel

updateVizItem

Class be.svlandeg.diffany.cytoscape.gui.ModeDropDownModel extends AbstractListModel implements Serializable

Serialized Fields

selected

Class be.svlandeg.diffany.cytoscape.gui.ProjectDropDownModel extends AbstractListModel implements Serializable

Serialized Fields

empty

entries

selectedEntry

model

Class be.svlandeg.diffany.cytoscape.gui.SelectionTableModel extends AbstractTableModel implements Serializable

Serialized Fields

networkEntries

entryMap

referenceRow

columns

Class be.svlandeg.diffany.cytoscape.gui.TabPane extends JPanel implements Serializable

Serialized Fields

model

collectionDropDown

collectionModel

networkTableModel

runButton

networkTable

requireRefNetCheckBox

supportSlider

filterEdgesTable

filterTableModel

hideNodesToggle