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AbstractVisualDiffanyStyle
ActivityFlowTest
Attribute
Bandyopadhyay2010
CalculateDiff
CalculateDiff.RunMode
Condition
ConditionNetwork
ConflictingEdgesTest
ConsensusNetwork
CyActivator
CyNetworkBridge
CyNetworkBridge.NetworkType
CyProject
DefaultDiffEdgeDrawing
DefaultEdgeOntology
DefaultSourceEdgeDrawing
DiffanyOptions
DifferentialNetwork
Edge
EdgeByEdge
EdgeComparison
EdgeDefinition
EdgeDrawing
EdgeFilterTableModel
EdgeGenerator
EdgeIO
EdgeOntology
EdgeStyle
EdgeStyle.ArrowHead
ExampleCode
ExtraDiffanyVisMappings
ExtraOptionsMenu
ExtraVisMappings
FuzzyNetworks
FuzzyNetworks2
GenePrinter
GenericExample
Ideker2011
InputNetwork
InvalidRunConfigurationException
KinaseData
LoadExampleAction
LoadExampleTask
LoadExampleTaskFactory
LogEntry
Logger
MapID
MetaOptions
ModeDropDownModel
Model
Model.ComparisonMode
Model.OverlapOperator
MultipleConditionTest
Network
NetworkAnalysis
NetworkCleaning
NetworkConstruction
NetworkEntry
NetworkIO
Node
NodeComparison
NodeIO
NodeMapper
OsmoticSampleTest
OsmoticUseCase
OutputNetworkPair
OverexpressionData
OverexpressionIO
PPIdata
ProcessTest
ProgressListener
Project
ProjectDropDownModel
ReferenceNetwork
RegData
Run
RunAnalysis
RunConfiguration
RunConsole
RunDiffConfiguration
RunOutput
RunProject
RunProjectAction
RunProjectTask
RunProjectTaskFactory
ScheduledTask
SelectionTableModel
Services
SessionListener
StandardProgressListener
TabPane
TreeEdgeDrawing
TreeEdgeOntology
Unification
UpdateVisualStyleAction
UpdateVisualStyleTask
UpdateVisualStyleTaskFactory
VisualDiffStyle
VisualSourceStyle