Categories: Cytoscape, miRNA-gene network, network analysis, network generation, non-coding RNA, regulatory networks, systems biology, visualization

*cymirCNV* is a Cytoscape plug-in designed for constructing and visualizing miRNA-gene correlation networks from expression data. It supports **Pearson and Spearman** correlation analysis, allowing users to explore regulatory interactions with customizable thresholds. Ideal for researchers studying miRNA-mediated gene regulation, *cymirCNV* streamlines data preprocessing, correlation computation, and network visualization within Cytoscape. - The tutorial to use this application is given in the [`cymirCNV github`](https://github.com/optimalboar576/cymirCNV) repository. - The example files can be found here-- - [miRNA expression file](https://github.com/optimalboar576/cymirCNV/blob/main/example_data/miRNA.csv) - [mRNA expression file](https://github.com/optimalboar576/cymirCNV/blob/main/example_data/mRNA.csv)

Authors:

• Rajesh Das (Department of Bioinformatics, Pondicherry University)
• Vigneshwar Suriya Prakash Sinnarasan (Department of Bioinformatics, Pondicherry University)
• Dahrii Paul (Department of Bioinformatics, Pondicherry University)
• Md Mujibur Rahman Sheikh (Department of Bioinformatics, Pondicherry University)
• Amouda Venkatesan (Department of Bioinformatics, Pondicherry University)