Categories: cancer data analysis, Community detection, Connection sub-graph discovery, layout

CyFinder is used to find various types of subnetworks with the purpose of identifying biomarkers in disease networks. Features include: 1- Finding Clique Subgraphs. 2- Finding Maximal Cliques. 3- Finding Bipartite subgraphs. 4- Finding Maximal Bicliques of Bipartite Subgraph. 5- Bipartite Layout for 2-column partite set visualization. 6- Finding Connected Components. 7- Community Detection with multiple Algorithms. 8- Finding Minimum/Maximum Spanning Forest 9- Intersecting Networks & Collections as a way of similarity analysis. 10 - Finding Crosstalk between disjoint Subgraphs.

Authors:

• Charles A. Schultz (Claflin University)
• Ananda M. Mondal (Florida International University)
• Cesar Martin (Florida International University)
• Raihanul Bari Tanvir (Florida International University)