CyCommunityDetection, the Cytoscape App component of Community Detection APplication and Service (CDAPS), performs multiscale community detection and functional enrichment for network analysis through a service-oriented architecture. These features are provided by integrating popular community detection algorithms and enrichment tools. All the algorithms and tools run remotely on a dedicated server.
Currently supported features:
* Community detection algorithms: Louvain, Infomap, OSLOM, CliXO, HiDeF
* Functional enrichment tools: g:Profiler, Enrichr, iQuery
**If you use CyCommunityDetection in your research please cite:**
Singhal A, Cao S, Churas C, Pratt D, Fortunato S, Zheng F, et al. (2020) Multiscale community detection in Cytoscape. PLoS Comput Biol 16(10): e1008239. https://doi.org/10.1371/journal.pcbi.1008239