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C

checkedRun(TaskMonitor) - Method in class org.wikipathways.cytoscapeapp.ResultTask

Run the task and return its result.

create() - Method in interface org.wikipathways.cytoscapeapp.WPClientFactory

Create a new WikiPathways client.

G

get() - Method in class org.wikipathways.cytoscapeapp.ResultTask

Return the result that checkedRun returned.

getId() - Method in class org.wikipathways.cytoscapeapp.WPPathway

getName() - Method in class org.wikipathways.cytoscapeapp.WPPathway

getRevision() - Method in class org.wikipathways.cytoscapeapp.WPPathway

getSpecies() - Method in class org.wikipathways.cytoscapeapp.WPPathway

N

newFreeTextSearchTask(String, String) - Method in interface org.wikipathways.cytoscapeapp.WPClient

Return a task that searches WikiPathways for pathways that match the given query.

newLoadPathwayTask(WPPathway) - Method in interface org.wikipathways.cytoscapeapp.WPClient

Return a task that provides the Reader containing the GPML contents of pathway.

newSpeciesTask() - Method in interface org.wikipathways.cytoscapeapp.WPClient

Return a task that retrieves the list of species recognized by WikiPathways.

O

org.wikipathways.cytoscapeapp - package org.wikipathways.cytoscapeapp

R

result - Variable in class org.wikipathways.cytoscapeapp.ResultTask

ResultTask<T> - Class in org.wikipathways.cytoscapeapp

Specifies a task that can return a result.

ResultTask() - Constructor for class org.wikipathways.cytoscapeapp.ResultTask

run(TaskMonitor) - Method in class org.wikipathways.cytoscapeapp.ResultTask

T

toString() - Method in class org.wikipathways.cytoscapeapp.WPPathway

W

WPClient - Interface in org.wikipathways.cytoscapeapp

Issues requests to WikiPathways.

WPClientFactory - Interface in org.wikipathways.cytoscapeapp

Used as an OSGi service to create new WikiPathways clients.

WPPathway - Class in org.wikipathways.cytoscapeapp

Represents a pathway on WikiPathways.

WPPathway(String, String, String, String) - Constructor for class org.wikipathways.cytoscapeapp.WPPathway

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