public class AutomationGeneEnrichmentTask extends AbstractEnrichmentTask implements org.cytoscape.work.ObservableTask
Modifier and Type | Field and Description |
---|---|
String |
columnName |
Integer |
minNumGenes |
boolean |
newNetwork |
double |
pvalueThreshold |
String |
source |
String |
typeId |
Constructor and Description |
---|
AutomationGeneEnrichmentTask(org.cytoscape.view.model.CyNetworkView cyNetworkView,
Long selectedNetwork,
String columnName,
String source,
String typeId,
boolean newNetwork,
double pvalueThreshold,
Integer minNumGenes) |
Modifier and Type | Method and Description |
---|---|
List<Class<?>> |
getResultClasses() |
<R> R |
getResults(Class<? extends R> type) |
void |
run(org.cytoscape.work.TaskMonitor taskMonitor) |
getConn, getCurrNetwork, getEnrichList, listNodeColumnsNames, main, openConnection, setUrlParams
cancel, getTaskIterator, insertTasksAfterCurrentTask, insertTasksAfterCurrentTask, setTaskIterator
public String typeId
public String columnName
public String source
public boolean newNetwork
public double pvalueThreshold
public Integer minNumGenes
public void run(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
run
in interface org.cytoscape.work.Task
run
in class AbstractEnrichmentTask
Exception
public <R> R getResults(Class<? extends R> type)
getResults
in interface org.cytoscape.work.ObservableTask
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