Package es.imim.DISGENET.internal
Class CyActivator
java.lang.Object
org.cytoscape.service.util.AbstractCyActivator
es.imim.DISGENET.internal.CyActivator
- All Implemented Interfaces:
org.osgi.framework.BundleActivator
public class CyActivator
extends org.cytoscape.service.util.AbstractCyActivator
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic org.cytoscape.view.layout.CyLayoutAlgorithmManager -
Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionorg.cytoscape.application.CyApplicationManagerorg.cytoscape.view.presentation.property.values.CyColumnIdentifierFactoryorg.osgi.framework.BundleContextorg.cytoscape.application.CyApplicationManagerorg.cytoscape.model.CyTableFactoryorg.cytoscape.model.CyTableManagerorg.cytoscape.application.swing.CySwingApplicationorg.cytoscape.work.swing.DialogTaskManagerorg.cytoscape.model.CyTableorg.cytoscape.work.TaskIteratorstatic CyActivatororg.cytoscape.model.CyNetworkTableManagerorg.cytoscape.model.CyNetworkFactoryorg.cytoscape.model.CyNetworkManagerorg.cytoscape.view.model.CyNetworkViewFactoryorg.cytoscape.view.model.CyNetworkViewManagerorg.cytoscape.service.util.CyServiceRegistrarorg.cytoscape.work.SynchronousTaskManagerorg.cytoscape.model.CyTableFactoryorg.cytoscape.work.TaskManagerorg.cytoscape.view.vizmap.VisualMappingManagerorg.cytoscape.view.vizmap.VisualStyleFactoryvoidsetColumnIdentifierFactory(org.cytoscape.view.presentation.property.values.CyColumnIdentifierFactory columnIdentifierFactory) voidsetContext(org.osgi.framework.BundleContext context) voidsetCustomGraphics(CustomChartListener customGraphics) voidsetCyApplicationManager(org.cytoscape.application.CyApplicationManager cyApplicationManager) voidsetCyTableFactory(org.cytoscape.model.CyTableFactory cyTableFactory) voidsetCyTableManager(org.cytoscape.model.CyTableManager cyTableManager) voidsetDisgenetNodeAttributesTable(org.cytoscape.model.CyTable table) voidsetNetTableMgr(org.cytoscape.model.CyNetworkTableManager netTableMgr) voidsetServiceRegistrar(org.cytoscape.service.util.CyServiceRegistrar serviceRegistrar) voidstart(org.osgi.framework.BundleContext context) voidunregister_disgenet_panel(DisGeNETCytoPanel disgenetCytoPanel) Methods inherited from class org.cytoscape.service.util.AbstractCyActivator
getService, getService, registerAllServices, registerAllServices, registerService, registerService, registerServiceListener, registerServiceListener, registerServiceListener, registerServiceListener, registerServiceListener, registerServiceListener, shutDown, stop
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Field Details
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layoutAlgoManager
public static org.cytoscape.view.layout.CyLayoutAlgorithmManager layoutAlgoManager
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Constructor Details
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CyActivator
public CyActivator()
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Method Details
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start
- Throws:
Exception
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getNetTableMgr
public org.cytoscape.model.CyNetworkTableManager getNetTableMgr() -
setNetTableMgr
public void setNetTableMgr(org.cytoscape.model.CyNetworkTableManager netTableMgr) -
getColumnIdentifierFactory
public org.cytoscape.view.presentation.property.values.CyColumnIdentifierFactory getColumnIdentifierFactory() -
setColumnIdentifierFactory
public void setColumnIdentifierFactory(org.cytoscape.view.presentation.property.values.CyColumnIdentifierFactory columnIdentifierFactory) -
getCyTableManager
public org.cytoscape.model.CyTableManager getCyTableManager() -
setCyTableManager
public void setCyTableManager(org.cytoscape.model.CyTableManager cyTableManager) -
getCyTableFactory
public org.cytoscape.model.CyTableFactory getCyTableFactory() -
setCyTableFactory
public void setCyTableFactory(org.cytoscape.model.CyTableFactory cyTableFactory) -
getCyApplicationManager
public org.cytoscape.application.CyApplicationManager getCyApplicationManager() -
setCyApplicationManager
public void setCyApplicationManager(org.cytoscape.application.CyApplicationManager cyApplicationManager) -
getCustomGraphics
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setCustomGraphics
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getServiceRegistrar
public org.cytoscape.service.util.CyServiceRegistrar getServiceRegistrar() -
getContext
public org.osgi.framework.BundleContext getContext() -
setContext
public void setContext(org.osgi.framework.BundleContext context) -
setServiceRegistrar
public void setServiceRegistrar(org.cytoscape.service.util.CyServiceRegistrar serviceRegistrar) -
getInstance
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getDesktopService
public org.cytoscape.application.swing.CySwingApplication getDesktopService() -
getTableFactoryService
public org.cytoscape.model.CyTableFactory getTableFactoryService() -
getNetworkFactoryService
public org.cytoscape.model.CyNetworkFactory getNetworkFactoryService() -
getNetworkManagerService
public org.cytoscape.model.CyNetworkManager getNetworkManagerService() -
getNetworkViewFactoryService
public org.cytoscape.view.model.CyNetworkViewFactory getNetworkViewFactoryService() -
getApplicationManagerService
public org.cytoscape.application.CyApplicationManager getApplicationManagerService() -
getNetworkViewManagerService
public org.cytoscape.view.model.CyNetworkViewManager getNetworkViewManagerService() -
getGlobalTaskIterator
public org.cytoscape.work.TaskIterator getGlobalTaskIterator() -
getDialogTaskManagerService
public org.cytoscape.work.swing.DialogTaskManager getDialogTaskManagerService() -
getTaskManagerService
public org.cytoscape.work.TaskManager getTaskManagerService() -
getSynchTaskManagerService
public org.cytoscape.work.SynchronousTaskManager getSynchTaskManagerService() -
unregister_disgenet_panel
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setDisgenetNodeAttributesTable
public void setDisgenetNodeAttributesTable(org.cytoscape.model.CyTable table) -
getDisgenetNodeAttributesTable
public org.cytoscape.model.CyTable getDisgenetNodeAttributesTable() -
getVisualMappingMgr
public org.cytoscape.view.vizmap.VisualMappingManager getVisualMappingMgr() -
getVisualStyleFactor
public org.cytoscape.view.vizmap.VisualStyleFactory getVisualStyleFactor() -
getMainPanel
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getEnrichmentTables
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getShowEnrichmentFactory
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