es.imim.DisGeNET.internal.enrichment

Class GeneEnrichment

java.lang.Object

es.imim.DisGeNET.internal.enrichment.GeneEnrichment

public class GeneEnrichment
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
static String	colGenesBG
static String	colGenesRatio
static String	colGenesSUID
static String	colID
static String	colListGenes
static String	colListSymbols
static String	colName
static String	colPvalue
static String	colPvalueAdj
static String	colSource
static String	enrichmentURL
static String[]	swingColumnsEnrichment

Constructor Summary

Constructors

Constructor and Description
GeneEnrichment()
GeneEnrichment(String cui, String name, String source, String universe, String geneRatio, String bgRatio, Double pValue, Double adjPValue, List<Integer> geneIds, List<String> geneSymbols, List<Long> geneNodes)

Method Summary

Modifier and Type	Method and Description
Double	getAdjPValue()
String	getBgRatio()
List<Integer>	getGeneIds()
List<Long>	getGeneNodes()
String	getGeneRatio()
List<String>	getGeneSymbols()
String	getName()
int	getNumberGenes()
Double	getpValue()
String	getSource()
String	getUniverse()
void	setAdjPValue(Double adjPValue)
void	setBgRatio(String bgRatio)
void	setGeneIds(List<Integer> geneIds)
void	setGeneNodes(List<Long> geneNodes)
void	setGeneRatio(String geneRatio)
void	setGeneSymbols(List<String> geneSymbols)
void	setName(String name)
void	setpValue(Double pValue)
void	setSource(String source)
void	setUniverse(String universe)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

enrichmentURL

public static final String enrichmentURL

See Also:

Constant Field Values

colID

public static final String colID

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Constant Field Values

colName

public static final String colName

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Constant Field Values

colSource

public static final String colSource

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Constant Field Values

colGenesRatio

public static final String colGenesRatio

See Also:

Constant Field Values

colGenesBG

public static final String colGenesBG

See Also:

Constant Field Values

colListGenes

public static final String colListGenes

See Also:

Constant Field Values

colListSymbols

public static final String colListSymbols

See Also:

Constant Field Values

colPvalue

public static final String colPvalue

See Also:

Constant Field Values

colPvalueAdj

public static final String colPvalueAdj

See Also:

Constant Field Values

colGenesSUID

public static final String colGenesSUID

See Also:

Constant Field Values

swingColumnsEnrichment

public static final String[] swingColumnsEnrichment

Constructor Detail

GeneEnrichment

public GeneEnrichment()

GeneEnrichment

public GeneEnrichment(String cui,
                      String name,
                      String source,
                      String universe,
                      String geneRatio,
                      String bgRatio,
                      Double pValue,
                      Double adjPValue,
                      List<Integer> geneIds,
                      List<String> geneSymbols,
                      List<Long> geneNodes)

Method Detail

getNumberGenes

public int getNumberGenes()

getName

public String getName()

setName

public void setName(String name)

getSource

public String getSource()

setSource

public void setSource(String source)

getUniverse

public String getUniverse()

setUniverse

public void setUniverse(String universe)

getGeneRatio

public String getGeneRatio()

setGeneRatio

public void setGeneRatio(String geneRatio)

getBgRatio

public String getBgRatio()

setBgRatio

public void setBgRatio(String bgRatio)

getpValue

public Double getpValue()

setpValue

public void setpValue(Double pValue)

getAdjPValue

public Double getAdjPValue()

setAdjPValue

public void setAdjPValue(Double adjPValue)

getGeneIds

public List<Integer> getGeneIds()

setGeneIds

public void setGeneIds(List<Integer> geneIds)

getGeneSymbols

public List<String> getGeneSymbols()

setGeneSymbols

public void setGeneSymbols(List<String> geneSymbols)

getGeneNodes

public List<Long> getGeneNodes()

setGeneNodes

public void setGeneNodes(List<Long> geneNodes)