Serialized Form

Package cyTransFinder

Class cyTransFinder.AddCytoPanelAction extends org.cytoscape.application.swing.AbstractCyAction implements Serializable

serialVersionUID:

8252806967891823933L

Serialized Fields

desktopApp

org.cytoscape.application.swing.CySwingApplication desktopApp

cytoPanelWest

org.cytoscape.application.swing.CytoPanel cytoPanelWest

myCytoPanel

MyCytoPanel myCytoPanel

Class cyTransFinder.MyCytoPanel extends JPanel implements Serializable

serialVersionUID:

8292806967891823933L

Serialized Fields

myActivator

CyActivator myActivator

myView

org.cytoscape.view.model.CyNetworkView myView

visStyle

org.cytoscape.view.vizmap.VisualStyle visStyle

organismIDs

UtilOrganism organismIDs

printButtonPanel

JPanel printButtonPanel

DEBUG

JPanel DEBUG

STD_PANEL

JPanel STD_PANEL

comboChoice

String[] comboChoice

comboOrganism

JComboBox<E> comboOrganism

labelSelectedDataInput

JLabel labelSelectedDataInput

labelSelectedDataOutput

JLabel labelSelectedDataOutput

loadSource

JButton loadSource

loadDestination

JButton loadDestination

loadCurrentNetwork

JButton loadCurrentNetwork

TMP_BUT

JButton TMP_BUT

motifArray

String[] motifArray

comboMotifType

JComboBox<E> comboMotifType

myMotif

String[] myMotif

enhanceAllTmirnaFinal

JCheckBox enhanceAllTmirnaFinal

mirnaCombo1_Labels

String[] mirnaCombo1_Labels

mirnaCombo1_MaturePrecursor

JComboBox<E> mirnaCombo1_MaturePrecursor

mirnaCombo2_Labels

String[] mirnaCombo2_Labels

mirnaCombo2_ExactAtleast

JComboBox<E> mirnaCombo2_ExactAtleast

mirnaCombo3_Labels

String[] mirnaCombo3_Labels

mirnaCombo3_Sources

JComboBox<E> mirnaCombo3_Sources

mirnaCombo4_Labels

String[] mirnaCombo4_Labels

mirnaCombo4_SpecificUnspecificDBs

JComboBox<E> mirnaCombo4_SpecificUnspecificDBs

combo1_mirnaMature

Boolean combo1_mirnaMature

combo2_mirnaExactAtleast

Boolean combo2_mirnaExactAtleast

combo3_Sources

Integer combo3_Sources

combo4_mirnaSpecificUnspecificDBs

Boolean combo4_mirnaSpecificUnspecificDBs

databasesMirandaCheckButton

JCheckBox databasesMirandaCheckButton

databasesPictarCheckButton

JCheckBox databasesPictarCheckButton

databasesMirtarbaseCheckButton

JCheckBox databasesMirtarbaseCheckButton

databasesTargetscanCheckButton

JCheckBox databasesTargetscanCheckButton

mirnaCombo44_Labels

String[] mirnaCombo44_Labels

mirnaCombo44_Sources

JComboBox<E> mirnaCombo44_Sources

labelEnhance1

JLabel labelEnhance1

labelEnhance2

JLabel labelEnhance2

labelEnhance3

JLabel labelEnhance3

labelEnhance4

JLabel labelEnhance4

labelEnhance5

JLabel labelEnhance5

labelEnhance6

JLabel labelEnhance6

labelEnhance7

JLabel labelEnhance7

labelEnhance8

JLabel labelEnhance8

label3

JLabel label3

label4

JLabel label4

label5

JLabel label5

runEnhancement

JButton runEnhancement

clearALL

JButton clearALL