Package org.cy3sbml.layout

Class XMLInterface

java.lang.Object

org.cy3sbml.layout.XMLInterface

public class XMLInterface
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
static final String	BOX
static final String	BOX_CYID
static final String	BOX_GLYPH
static final String	BOX_HEIGHT
static final String	BOX_ID
static final String	BOX_LIST
static final String	BOX_WIDTH
static final String	BOX_X
static final String	BOX_Y
static final String	LAYOUT

Constructor Summary

Constructors

Constructor	Description
XMLInterface()

Method Summary

Modifier and Type	Method	Description
static List<CyBoundingBox>	readLayoutFromXML(File xmlFile)	Reads the bounding boxes of the layout file, or returns an empty list if the file cannot be read.
static void	writeXMLFileForLayout(File xmlFile, Collection<CyBoundingBox> boxes)	Writes the bounding boxes to the layout file.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

LAYOUT

public static final String LAYOUT

See Also:

• Constant Field Values

BOX_LIST

public static final String BOX_LIST

See Also:

• Constant Field Values

BOX

public static final String BOX

See Also:

• Constant Field Values

BOX_CYID

public static final String BOX_CYID

See Also:

• Constant Field Values

BOX_ID

public static final String BOX_ID

See Also:

• Constant Field Values

BOX_GLYPH

public static final String BOX_GLYPH

See Also:

• Constant Field Values

BOX_X

public static final String BOX_X

See Also:

• Constant Field Values

BOX_Y

public static final String BOX_Y

See Also:

• Constant Field Values

BOX_HEIGHT

public static final String BOX_HEIGHT

See Also:

• Constant Field Values

BOX_WIDTH

public static final String BOX_WIDTH

See Also:

• Constant Field Values

Constructor Details

XMLInterface

public XMLInterface()

Method Details

writeXMLFileForLayout

public static void writeXMLFileForLayout(File xmlFile,
 Collection<CyBoundingBox> boxes)
                                  throws IOException

Writes the bounding boxes to the layout file.

Throws:

IOException - if the file could not be written

readLayoutFromXML

public static List<CyBoundingBox> readLayoutFromXML(File xmlFile)

Reads the bounding boxes of the layout file, or returns an empty list if the file cannot be read.