Annotates metabolic networks with MeSH disease terms and links to references.
MetDisease allows users to annotate a metabolic network with MeSH disease terms, explore related diseases within a network, and link to PubMed references corresponding to any network node and selection of MeSH terms. Both KEGG IDs and PubChem IDs are supported. This work developed at the University of Michigan, Department of Computational Medicine and Bioinformatics (DCMB), under National Institutes of Health Grants #U54DA021519 and #U24DK097153.


Works with Cytoscape 3.0

Release Notes

New features: - MeSH disease terms associated with any compound in a network can now be searched using the Cytoscape search window. The list of associated diseases for each compound is in the "MeSH Diseases" column of the node table. - In addition to the existing options of finding MeSH disease terms based on KEGG and PubChem ids, there is now an option to find MeSH terms based on compound names. The names are mapped into KEGG and/or PubChem ids, which are stored in the node table in the "Mapped KEGG Id" and Mapped PubChem Id" columns, respectively.


Works with Cytoscape 3.0


Version 1.1.0

Released 4 Mar 2014

Works with Cytoscape 3.0

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