DisGeNET-app

The App is designed to visualize, query and analyse a network representation of DisGeNET data (version 6.0)
The DisGeNET Cytoscape App is designed to visualize, query and analyse a network representation of the gene, and variant -disease associations in DisGeNET. The DisGeNET Cytoscape App uses the current version (6.0) of the DisGeNET data. In the App, gene-disease networks, disease-disease networks, and gene-gene networks are generated. The App assists the user in the interpretation and exploration of human complex diseases with respect to their genetic origin by a variety of built-in functions. Using the DisGeNET Cytoscape App you can perform queries restricted to (i) the original data source (ii) the association type (iii) the disorder class of interest (iv) a range of score (v) a range of evidence index (vi) an evidence level (vii) specific diseases, genes, or variants, or combinations of them (viii) lists of diseases, genes, or variants, or combinations of them The app also allows: <p> 1. Colouring nodes by disease class <p> 2. Accessing the data via REST <p> 3. Annotating DisGeNET gene projections with diseases <p> 4. Expanding node information by data source <p> 5. Easier annotation of external protein, and variant networks with diseases <p>

6.2.1

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

new filters have been added to the external network annotation menu Fixed minor bug in the evidence level filter in the external network annotation menu

6.2.0

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

added possibility of changing database location implemented new filters for expand function and for annotating external networks

6.0.3

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

Fixed bug in search with wild card character in gene box in VDAs tab Fixed bug in filter by association type in VDAs tab

6.0.2

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

Fixed expand gene function

6.0.1

Works with Cytoscape 3.6

API   pom.xml   Javadocs


6.0.0

Works with Cytoscape 3.6

API   pom.xml   Javadocs


5.4.0

Works with Cytoscape 3.6

API   pom.xml   Javadocs


5.3

Works with Cytoscape 3.6

API   pom.xml   Javadocs


5.2

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

Automation added

5.1

Works with Cytoscape 3.6

API   pom.xml   Javadocs

Release Notes

Corrected bugs Added utilities to explore variant-disease associations

5.0

Works with Cytoscape 3.2

API   pom.xml   Javadocs


1.0

Works with Cytoscape 3.2

API   pom.xml   Javadocs


CYTOSCAPE 3

Version 6.2.1

License Click here

Released 10 May 2019

Works with Cytoscape 3.6

Download Stats Click here