ContigScape

An interactive guidance tool for microbial genome gap closure
(2)
###Introduction Due to the repeats and low quality regions in NGS sequencing, gap closing is often evitable. ContigScape will guide you in designing primers after 454 or mate-paired sequencing by showing the possible relationship between contigs in a network representation.<p> ###Citation Tang B*, Wang Q*, Yang M, Xie F, Zhu Y, Zhuo Y, Wang S, Gao H, Ding X, Zhang L#, Zhao G, Zheng H#. ContigScape: a Cytoscape plugin facilitating microbial genome gap closing. BMC Genomics. 2013 Apr 30;14(1):289. PMID: [http://www.ncbi.nlm.nih.gov/pubmed/23627759 23627759] ###Manual, Test Data [http://sourceforge.net/projects/contigscape/files/]
CYTOSCAPE 2

Version 1.0

Released 1 May 2013

Works with Cytoscape 2.8

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