org.wikipathways.cytoscapeapp org.wikipathways.cytoscapeapp 3.1.0 4.0.0 org.wikipathways cytoscapeapp 3.1 WikiPathways Cytoscape App bundle src/main/resources WikiPathways-${project.version} org.apache.maven.plugins maven-compiler-plugin 2.3.2 default-testCompile test-compile testCompile default-compile compile compile 1.6 1.6 true true true 10000 10000 org.apache.maven.plugins maven-surefire-plugin 2.7.1 true org.apache.maven.plugins maven-install-plugin 2.3.1 install-file install ${build.directory}/${project.build.finalName}.jar false pom.xml ${my.version} org.apache.felix maven-bundle-plugin 2.3.7 true ${bundle.symbolicName} ${project.version} ${bundle.namespace}.internal.*,${bundle.namespace}.impl.* ${bundle.namespace} ${bundle.namespace}.internal.CyActivator org.xml.sax;resolution:=optional,javax.xml.transform;resolution:=optional, javax.xml.transform.stream;resolution:=optional, javax.xml.parsers;resolution:=optional,org.xml.sax.helpers;resolution:=optional, org.xml.sax.ext;resolution:=optional,javax.xml.validation;resolution:=optional,* WikiPathways org.apache.maven.plugins maven-shade-plugin 2.1 package shade org.pathvisio:pathvisio-core com.springsource:org.jdom org.bridgedb:bridgedb org.bridgedb:bridgedb-bio derby:derby org.apache.maven.plugins maven-javadoc-plugin *.impl:*.internal cytoscape_snapshots false Cytoscape Snapshots http://code.cytoscape.org/nexus/content/repositories/snapshots/ cytoscape_releases false Cytoscape Releases http://code.cytoscape.org/nexus/content/repositories/releases/ com.springsource.repository.bundles.release SpringSource Enterprise Bundle Repository - SpringSource Bundle Releases http://repository.springsource.com/maven/bundles/release com.springsource.repository.bundles.external SpringSource Enterprise Bundle Repository - External Bundle Releases http://repository.springsource.com/maven/bundles/external org.osgi org.osgi.core 4.2.0 org.cytoscape service-api ${cytoscape.api.version} org.cytoscape core-task-api ${cytoscape.api.version} org.cytoscape swing-application-api ${cytoscape.api.version} org.cytoscape session-api ${cytoscape.api.version} org.cytoscape webservice-api ${cytoscape.api.version} org.cytoscape io-api ${cytoscape.api.version} org.cytoscape swing-util-api ${cytoscape.api.version} org.cytoscape swing-app-api ${cytoscape.api.version} org.cytoscape app-api ${cytoscape.api.version} org.cytoscape presentation-api ${cytoscape.api.version} org.cytoscape vizmap-api ${cytoscape.api.version} org.cytoscape work-api ${cytoscape.api.version} org.ops4j.pax.logging pax-logging-api 1.5.2 provided com.springsource org.jdom 1.1.0 true org.pathvisio pathvisio-core 3.1.1 true org.bridgedb bridgedb 1.2.2 true org.bridgedb bridgedb-bio 1.2.2 true derby derby 10.4 true org.apache.commons com.springsource.org.apache.commons.httpclient 3.1.0 provided