Package es.imim.DISGENET.internal.annotation

Class AnnotateVariantsTask

java.lang.Object
org.cytoscape.work.AbstractTask
es.imim.DISGENET.internal.annotation.AnnotateVariantsTask
All Implemented Interfaces:
org.cytoscape.work.Task
public class AnnotateVariantsTask extends org.cytoscape.work.AbstractTask

  • Field Details

    • columnNames

      public org.cytoscape.work.util.ListSingleSelection<Callable<org.cytoscape.model.CyColumn>> columnNames

    • sources

      public org.cytoscape.work.util.ListSingleSelection<String> sources

    • diseaseClasses

      public org.cytoscape.work.util.ListSingleSelection<String> diseaseClasses

    • minScoreRange

      public Double minScoreRange

    • maxScoreRange

      public Double maxScoreRange

  • Constructor Details

    • AnnotateVariantsTask

      public AnnotateVariantsTask(org.cytoscape.view.model.CyNetworkView cyNetworkView, String source)

  • Method Details

    • buildSearchField

      public String buildSearchField() throws DisGeNetException
      Throws:
      DisGeNetException

    • run

      public void run(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
      Specified by:
      run in interface org.cytoscape.work.Task
      Specified by:
      run in class org.cytoscape.work.AbstractTask
      Throws:
      Exception