Package es.imim.DISGENET.internal.annotation

Class AnnotateDiseasesTask

java.lang.Object
org.cytoscape.work.AbstractTask
es.imim.DISGENET.internal.annotation.AnnotateDiseasesTask
All Implemented Interfaces:
org.cytoscape.work.Task
public class AnnotateDiseasesTask extends org.cytoscape.work.AbstractTask

  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    org.cytoscape.work.util.ListSingleSelection<String>
    assocTypes
     
    org.cytoscape.work.util.ListSingleSelection<Callable<org.cytoscape.model.CyColumn>>
    columnNames
     
    Double
    maxScoreRange
     
    Double
    minScoreRange
     
    org.cytoscape.work.util.ListSingleSelection<String>
    sources
     

    Fields inherited from class org.cytoscape.work.AbstractTask

    cancelled

  • Constructor Summary

    Constructors
    Constructor
    Description
    AnnotateDiseasesTask​(org.cytoscape.view.model.CyNetworkView cyNetworkView, int type)
     

  • Method Summary

    Modifier and Type
    Method
    Description
    String
    buildSearchField()
     
    void
    run​(org.cytoscape.work.TaskMonitor taskMonitor)
     

    Methods inherited from class org.cytoscape.work.AbstractTask

    cancel, getTaskIterator, insertTasksAfterCurrentTask, insertTasksAfterCurrentTask, setTaskIterator

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Field Details

    • columnNames

      public org.cytoscape.work.util.ListSingleSelection<Callable<org.cytoscape.model.CyColumn>> columnNames

    • sources

      public org.cytoscape.work.util.ListSingleSelection<String> sources

    • assocTypes

      public org.cytoscape.work.util.ListSingleSelection<String> assocTypes

    • minScoreRange

      public Double minScoreRange

    • maxScoreRange

      public Double maxScoreRange

  • Constructor Details

    • AnnotateDiseasesTask

      public AnnotateDiseasesTask​(org.cytoscape.view.model.CyNetworkView cyNetworkView, int type)

  • Method Details

    • run

      public void run​(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
      Specified by:
      run in interface org.cytoscape.work.Task
      Specified by:
      run in class org.cytoscape.work.AbstractTask
      Throws:
      Exception

    • buildSearchField

      public String buildSearchField() throws DisGeNetException
      Throws:
      DisGeNetException